Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
SIX4Q9UIU6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIX4Q9UIU6 AC005224.4-201ENST00000583262 1652 ntBASIC23.16■■□□□ 1.3
SIX4Q9UIU6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 AC242852.2-201ENST00000615738 1807 ntBASIC23.15■■□□□ 1.3
SIX4Q9UIU6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 KRT18P14-201ENST00000534205 1250 ntBASIC23.15■■□□□ 1.3
SIX4Q9UIU6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 AC009237.3-201ENST00000393279 1427 ntBASIC23.15■■□□□ 1.3
SIX4Q9UIU6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SIX4Q9UIU6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SIX4Q9UIU6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SIX4Q9UIU6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SIX4Q9UIU6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.14■■□□□ 1.29
SIX4Q9UIU6 MIR5787-201ENST00000611784 55 ntBASIC23.14■■□□□ 1.29
SIX4Q9UIU6 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.14■■□□□ 1.29
SIX4Q9UIU6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SIX4Q9UIU6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX4Q9UIU6 AC055733.4-201ENST00000638462 1354 ntBASIC23.14■■□□□ 1.29
SIX4Q9UIU6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.13■■□□□ 1.29
SIX4Q9UIU6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 AC034268.1-201ENST00000441047 882 ntBASIC23.12■■□□□ 1.29
SIX4Q9UIU6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 AC092053.2-201ENST00000640557 1818 ntBASIC23.12■■□□□ 1.29
SIX4Q9UIU6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SIX4Q9UIU6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 AL034346.1-201ENST00000568244 1277 ntBASIC23.11■■□□□ 1.29
SIX4Q9UIU6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.11■■□□□ 1.29
SIX4Q9UIU6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 KRT18P61-201ENST00000585825 1298 ntBASIC23.1■■□□□ 1.29
SIX4Q9UIU6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SIX4Q9UIU6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms