Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRFN1Q9P244 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 AP004607.7-201ENST00000527152 1677 ntBASIC19.76■□□□□ 0.75
LRFN1Q9P244 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRFN1Q9P244 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.76■□□□□ 0.75
LRFN1Q9P244 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN1Q9P244 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN1Q9P244 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN1Q9P244 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN1Q9P244 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRFN1Q9P244 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRFN1Q9P244 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN1Q9P244 KRT87P-202ENST00000534226 1464 ntBASIC19.74■□□□□ 0.75
LRFN1Q9P244 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN1Q9P244 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN1Q9P244 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN1Q9P244 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRFN1Q9P244 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LRFN1Q9P244 LINC00526-201ENST00000581067 1875 ntBASIC19.73■□□□□ 0.75
LRFN1Q9P244 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 DUSP8P5-201ENST00000422884 1815 ntBASIC19.73■□□□□ 0.75
LRFN1Q9P244 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LRFN1Q9P244 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRFN1Q9P244 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.72■□□□□ 0.75
LRFN1Q9P244 ESRRAP2-201ENST00000418437 1549 ntBASIC19.72■□□□□ 0.75
LRFN1Q9P244 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
LRFN1Q9P244 AL034346.1-201ENST00000568244 1277 ntBASIC19.72■□□□□ 0.75
LRFN1Q9P244 AC080038.1-201ENST00000611274 1154 ntBASIC19.72■□□□□ 0.75
LRFN1Q9P244 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRFN1Q9P244 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRFN1Q9P244 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
LRFN1Q9P244 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LRFN1Q9P244 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.71■□□□□ 0.75
LRFN1Q9P244 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN1Q9P244 AC055733.4-201ENST00000638462 1354 ntBASIC19.7■□□□□ 0.74
LRFN1Q9P244 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.7■□□□□ 0.74
LRFN1Q9P244 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.7■□□□□ 0.74
LRFN1Q9P244 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms