Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.52■□□□□ 0.56
TREM2Q9NZC2 AC104564.3-201ENST00000582367 638 ntBASIC18.52■□□□□ 0.56
TREM2Q9NZC2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TREM2Q9NZC2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TREM2Q9NZC2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.5■□□□□ 0.55
TREM2Q9NZC2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 AP005435.1-201ENST00000529293 1178 ntBASIC18.49■□□□□ 0.55
TREM2Q9NZC2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 MIR6084-201ENST00000622012 110 ntBASIC18.49■□□□□ 0.55
TREM2Q9NZC2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 LINC01960-201ENST00000563759 1884 ntBASIC18.49■□□□□ 0.55
TREM2Q9NZC2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 AC087742.1-201ENST00000575880 1738 ntBASIC18.49■□□□□ 0.55
TREM2Q9NZC2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TREM2Q9NZC2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AL162430.1-201ENST00000480705 870 ntBASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TREM2Q9NZC2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TREM2Q9NZC2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms