Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 AC080038.3-201ENST00000623346 1952 ntBASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 RNF165-205ENST00000588679 2904 ntBASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 AC139530.1-201ENST00000575312 1977 ntBASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 AL031602.1-201ENST00000633169 911 ntBASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRPL39Q9NYK5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
MRPL39Q9NYK5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRPL39Q9NYK5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRPL39Q9NYK5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 SERBP1P1-201ENST00000396021 1160 ntBASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 OR2I1P-207ENST00000453522 948 ntBASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 AC131212.1-201ENST00000613771 668 ntBASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRPL39Q9NYK5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
MRPL39Q9NYK5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 AL136116.3-201ENST00000402907 1138 ntBASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 AC011298.3-201ENST00000615796 283 ntBASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 AC092053.2-201ENST00000640557 1818 ntBASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MRPL39Q9NYK5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 AC068587.7-201ENST00000641602 218 ntBASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MRPL39Q9NYK5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms