Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
THUMPD1Q9NXG2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 MIR3181-201ENST00000578512 73 ntBASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THUMPD1Q9NXG2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.19■□□□□ 0.82
THUMPD1Q9NXG2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 AC005229.4-201ENST00000610085 2198 ntBASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 AC244015.2-201ENST00000616358 1861 ntBASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.18■□□□□ 0.82
THUMPD1Q9NXG2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 DUX4L19-201ENST00000557448 1267 ntBASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 OR7E47P-201ENST00000546390 1422 ntBASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THUMPD1Q9NXG2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 AL138724.1-201ENST00000606771 1088 ntBASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
THUMPD1Q9NXG2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THUMPD1Q9NXG2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms