Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HCFC1R1Q9NWW0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HCFC1R1Q9NWW0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.53■■□□□ 1.2
HCFC1R1Q9NWW0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 GUSBP6-202ENST00000438529 1198 ntBASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 TSPY6P-201ENST00000448518 926 ntBASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HCFC1R1Q9NWW0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 SLC7A5P2-201ENST00000553010 536 ntBASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 AC142086.2-201ENST00000569753 217 ntBASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.51■■□□□ 1.19
HCFC1R1Q9NWW0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 LINC00526-201ENST00000581067 1875 ntBASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HCFC1R1Q9NWW0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 AL138781.1-201ENST00000566567 1274 ntBASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HCFC1R1Q9NWW0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 OR7E47P-201ENST00000546390 1422 ntBASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 CNN2P6-201ENST00000439038 900 ntBASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 AC010141.2-201ENST00000452426 721 ntBASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HCFC1R1Q9NWW0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 CD99P1-205ENST00000527459 561 ntBASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 AC138907.5-202ENST00000569484 235 ntBASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
HCFC1R1Q9NWW0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.46■■□□□ 1.19
HCFC1R1Q9NWW0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.45■■□□□ 1.19
HCFC1R1Q9NWW0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HCFC1R1Q9NWW0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
HCFC1R1Q9NWW0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms