Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PARPBPQ9NWS1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PARPBPQ9NWS1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PARPBPQ9NWS1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PARPBPQ9NWS1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 AC012414.1-201ENST00000556676 535 ntBASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PARPBPQ9NWS1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 AL034346.1-201ENST00000568244 1277 ntBASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 SMUG1P1-201ENST00000590640 811 ntBASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PARPBPQ9NWS1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 AC139530.1-201ENST00000575312 1977 ntBASIC19.17■□□□□ 0.66
PARPBPQ9NWS1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.16■□□□□ 0.66
PARPBPQ9NWS1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 LINC00526-201ENST00000581067 1875 ntBASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 BX005040.4-201ENST00000637145 1518 ntBASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.15■□□□□ 0.66
PARPBPQ9NWS1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms