Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42SE2Q9NRR3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 TSPY9P-201ENST00000440215 945 ntBASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 TSPY11P-201ENST00000442607 1045 ntBASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.81□□□□□ -0.04
CDC42SE2Q9NRR3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 FEM1AP4-201ENST00000443167 1987 ntBASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42SE2Q9NRR3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 OR7E47P-201ENST00000546390 1422 ntBASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 AC104564.3-201ENST00000582367 638 ntBASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 AC133637.1-201ENST00000624115 1537 ntBASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42SE2Q9NRR3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 MIR6724-1-201ENST00000616420 92 ntBASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 MIR6724-2-201ENST00000616483 92 ntBASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 MIR6724-4-201ENST00000617390 92 ntBASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 MIR6724-3-201ENST00000622482 92 ntBASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC42SE2Q9NRR3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CDC42SE2Q9NRR3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms