Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.73■□□□□ 0.75
KRCC1Q9NPI7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRCC1Q9NPI7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRCC1Q9NPI7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRCC1Q9NPI7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRCC1Q9NPI7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 AC068587.7-201ENST00000641602 218 ntBASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KRCC1Q9NPI7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 AC133637.1-201ENST00000624115 1537 ntBASIC19.71■□□□□ 0.75
KRCC1Q9NPI7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 AC079089.2-201ENST00000531211 1277 ntBASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 AC087239.1-201ENST00000622671 572 ntBASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 AL137060.1-201ENST00000618151 2648 ntBASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRCC1Q9NPI7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 AL031602.1-201ENST00000633169 911 ntBASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 AC026310.3-201ENST00000625186 2373 ntBASIC19.69■□□□□ 0.74
KRCC1Q9NPI7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 KRT16P3-201ENST00000439127 1283 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 pRNA.6-201ENST00000610482 90 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 pRNA.5-201ENST00000612139 90 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 pRNA.11-201ENST00000618423 90 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 pRNA.13-201ENST00000619112 90 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 OR7E47P-201ENST00000546390 1422 ntBASIC19.68■□□□□ 0.74
KRCC1Q9NPI7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 UNC93B8-201ENST00000511903 705 ntBASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 AC092171.4-201ENST00000609130 632 ntBASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRCC1Q9NPI7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
KRCC1Q9NPI7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
KRCC1Q9NPI7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRCC1Q9NPI7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KRCC1Q9NPI7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms