Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
CD248Q9HCU0 AC144652.1-201ENST00000609974 1624 ntBASIC22.49■■□□□ 1.19
CD248Q9HCU0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.49■■□□□ 1.19
CD248Q9HCU0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CD248Q9HCU0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.49■■□□□ 1.19
CD248Q9HCU0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
CD248Q9HCU0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.49■■□□□ 1.19
CD248Q9HCU0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 AL354811.1-201ENST00000610286 706 ntBASIC22.49■■□□□ 1.19
CD248Q9HCU0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD248Q9HCU0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.48■■□□□ 1.19
CD248Q9HCU0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CD248Q9HCU0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.47■■□□□ 1.19
CD248Q9HCU0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD248Q9HCU0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.47■■□□□ 1.19
CD248Q9HCU0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 LINC01529-204ENST00000636474 1715 ntBASIC22.46■■□□□ 1.19
CD248Q9HCU0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 CCDC92B-201ENST00000575506 885 ntBASIC22.46■■□□□ 1.19
CD248Q9HCU0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CD248Q9HCU0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD248Q9HCU0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.45■■□□□ 1.19
CD248Q9HCU0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 AP005435.1-201ENST00000529293 1178 ntBASIC22.45■■□□□ 1.18
CD248Q9HCU0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 TERF1P2-201ENST00000583350 1212 ntBASIC22.45■■□□□ 1.18
CD248Q9HCU0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CD248Q9HCU0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.45■■□□□ 1.18
CD248Q9HCU0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CD248Q9HCU0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CD248Q9HCU0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CD248Q9HCU0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CD248Q9HCU0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CD248Q9HCU0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.44■■□□□ 1.18
CD248Q9HCU0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms