Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC008403.3-201ENST00000598924 454 ntBASIC20.41■□□□□ 0.86
CHD8Q9HCK8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 CYP2T3P-201ENST00000601990 817 ntBASIC20.41■□□□□ 0.86
CHD8Q9HCK8 AC135731.1-201ENST00000569415 2548 ntBASIC20.41■□□□□ 0.86
CHD8Q9HCK8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 AC144652.1-201ENST00000609974 1624 ntBASIC20.4■□□□□ 0.86
CHD8Q9HCK8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 CD177P1-201ENST00000606252 935 ntBASIC20.4■□□□□ 0.86
CHD8Q9HCK8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 AL161729.1-201ENST00000604104 1402 ntBASIC20.4■□□□□ 0.86
CHD8Q9HCK8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD8Q9HCK8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD8Q9HCK8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD8Q9HCK8 TERF1P5-201ENST00000477545 1207 ntBASIC20.39■□□□□ 0.85
CHD8Q9HCK8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD8Q9HCK8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 AC233263.1-201ENST00000578059 224 ntBASIC20.38■□□□□ 0.85
CHD8Q9HCK8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD8Q9HCK8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHD8Q9HCK8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD8Q9HCK8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD8Q9HCK8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD8Q9HCK8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD8Q9HCK8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 AC004687.1-201ENST00000579003 1625 ntBASIC20.36■□□□□ 0.85
CHD8Q9HCK8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 AC092803.2-201ENST00000564287 1899 ntBASIC20.36■□□□□ 0.85
CHD8Q9HCK8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD8Q9HCK8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 AC087499.1-201ENST00000418141 1075 ntBASIC20.35■□□□□ 0.85
CHD8Q9HCK8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD8Q9HCK8 AC092865.7-201ENST00000641832 219 ntBASIC20.35■□□□□ 0.85
CHD8Q9HCK8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC055733.4-201ENST00000638462 1354 ntBASIC20.34■□□□□ 0.85
CHD8Q9HCK8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 AC069236.1-201ENST00000604339 616 ntBASIC20.34■□□□□ 0.85
CHD8Q9HCK8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD8Q9HCK8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms