Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POPDC3Q9HBV1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 AC026310.3-201ENST00000625186 2373 ntBASIC21.21■□□□□ 0.99
POPDC3Q9HBV1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 AC104564.3-201ENST00000582367 638 ntBASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POPDC3Q9HBV1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POPDC3Q9HBV1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 BX842568.3-201ENST00000418104 571 ntBASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POPDC3Q9HBV1 AC026471.6-201ENST00000622954 1905 ntBASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POPDC3Q9HBV1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POPDC3Q9HBV1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 UNC93B3-201ENST00000308076 687 ntBASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.15■□□□□ 0.98
POPDC3Q9HBV1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms