Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC126544.1-201ENST00000580842 1059 ntBASIC27.19■■□□□ 1.94
CHMP4BQ9H444 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CHMP4BQ9H444 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
CHMP4BQ9H444 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 AC027682.1-201ENST00000562846 899 ntBASIC27.17■■□□□ 1.94
CHMP4BQ9H444 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHMP4BQ9H444 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHMP4BQ9H444 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 IGHV3-19-201ENST00000521488 291 ntBASIC27.15■■□□□ 1.94
CHMP4BQ9H444 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHMP4BQ9H444 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 AL355001.2-201ENST00000620617 1191 ntBASIC27.14■■□□□ 1.94
CHMP4BQ9H444 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
CHMP4BQ9H444 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CHMP4BQ9H444 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
CHMP4BQ9H444 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHMP4BQ9H444 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
CHMP4BQ9H444 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHMP4BQ9H444 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CHMP4BQ9H444 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.13■■□□□ 1.93
CHMP4BQ9H444 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.13■■□□□ 1.93
CHMP4BQ9H444 AC008764.7-201ENST00000593779 1081 ntBASIC27.13■■□□□ 1.93
CHMP4BQ9H444 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.13■■□□□ 1.93
CHMP4BQ9H444 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHMP4BQ9H444 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 AC010542.4-201ENST00000563151 1910 ntBASIC27.12■■□□□ 1.93
CHMP4BQ9H444 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
CHMP4BQ9H444 FBXW4P1-201ENST00000426721 2239 ntBASIC27.12■■□□□ 1.93
CHMP4BQ9H444 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 AP004607.7-201ENST00000527152 1677 ntBASIC27.11■■□□□ 1.93
CHMP4BQ9H444 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 PKD1P6-201ENST00000343738 4769 ntBASIC27.11■■□□□ 1.93
CHMP4BQ9H444 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 AC110285.6-201ENST00000617652 491 ntBASIC27.11■■□□□ 1.93
CHMP4BQ9H444 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP4BQ9H444 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 AC099791.1-201ENST00000416440 715 ntBASIC27.1■■□□□ 1.93
CHMP4BQ9H444 AC104564.3-201ENST00000582367 638 ntBASIC27.1■■□□□ 1.93
CHMP4BQ9H444 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.1■■□□□ 1.93
CHMP4BQ9H444 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms