Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 AC026471.6-201ENST00000622954 1905 ntBASIC19.96■□□□□ 0.79
SLC38A1Q9H2H9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 AP005435.1-201ENST00000529293 1178 ntBASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SLC38A1Q9H2H9 AC244015.2-201ENST00000616358 1861 ntBASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 AC131212.1-201ENST00000613771 668 ntBASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 AC026310.3-201ENST00000625186 2373 ntBASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A1Q9H2H9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC38A1Q9H2H9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 AL137060.1-201ENST00000618151 2648 ntBASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC38A1Q9H2H9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 UNC93B3-201ENST00000308076 687 ntBASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 MIR4767-201ENST00000582827 78 ntBASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A1Q9H2H9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A1Q9H2H9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A1Q9H2H9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SLC38A1Q9H2H9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A1Q9H2H9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms