Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS16Q9H269 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS16Q9H269 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS16Q9H269 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS16Q9H269 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS16Q9H269 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
VPS16Q9H269 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.65■■□□□ 1.38
VPS16Q9H269 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS16Q9H269 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS16Q9H269 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS16Q9H269 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
VPS16Q9H269 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
VPS16Q9H269 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS16Q9H269 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS16Q9H269 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS16Q9H269 GUSBP5-201ENST00000418136 578 ntBASIC23.64■■□□□ 1.37
VPS16Q9H269 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.64■■□□□ 1.37
VPS16Q9H269 MIR3181-201ENST00000578512 73 ntBASIC23.64■■□□□ 1.37
VPS16Q9H269 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
VPS16Q9H269 AL024507.2-201ENST00000606070 2574 ntBASIC23.63■■□□□ 1.37
VPS16Q9H269 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
VPS16Q9H269 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.63■■□□□ 1.37
VPS16Q9H269 MIR3621-201ENST00000580529 85 ntBASIC23.63■■□□□ 1.37
VPS16Q9H269 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
VPS16Q9H269 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 Z98882.1-201ENST00000622160 2253 ntBASIC23.63■■□□□ 1.37
VPS16Q9H269 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS16Q9H269 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS16Q9H269 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS16Q9H269 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
VPS16Q9H269 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS16Q9H269 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS16Q9H269 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS16Q9H269 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS16Q9H269 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS16Q9H269 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS16Q9H269 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS16Q9H269 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
VPS16Q9H269 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
VPS16Q9H269 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
VPS16Q9H269 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS16Q9H269 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS16Q9H269 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS16Q9H269 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
VPS16Q9H269 OR7E47P-201ENST00000546390 1422 ntBASIC23.6■■□□□ 1.37
VPS16Q9H269 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
VPS16Q9H269 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.6■■□□□ 1.37
VPS16Q9H269 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.6■■□□□ 1.37
VPS16Q9H269 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS16Q9H269 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
VPS16Q9H269 AF106564.1-201ENST00000607058 2553 ntBASIC23.6■■□□□ 1.37
VPS16Q9H269 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.6■■□□□ 1.37
VPS16Q9H269 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VPS16Q9H269 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
VPS16Q9H269 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.6■■□□□ 1.37
VPS16Q9H269 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
VPS16Q9H269 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.59■■□□□ 1.37
VPS16Q9H269 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.59■■□□□ 1.37
VPS16Q9H269 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.59■■□□□ 1.37
VPS16Q9H269 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.59■■□□□ 1.37
VPS16Q9H269 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.59■■□□□ 1.37
VPS16Q9H269 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VPS16Q9H269 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS16Q9H269 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS16Q9H269 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS16Q9H269 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.58■■□□□ 1.37
VPS16Q9H269 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS16Q9H269 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
VPS16Q9H269 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.58■■□□□ 1.36
VPS16Q9H269 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
VPS16Q9H269 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS16Q9H269 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
VPS16Q9H269 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS16Q9H269 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
VPS16Q9H269 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS16Q9H269 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS16Q9H269 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
VPS16Q9H269 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
VPS16Q9H269 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS16Q9H269 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS16Q9H269 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.57■■□□□ 1.36
VPS16Q9H269 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms