Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 pRNA.11-201ENST00000618423 90 ntBASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 pRNA.13-201ENST00000619112 90 ntBASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 AC110285.6-201ENST00000617652 491 ntBASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.31■■□□□ 1.32
NUCKS1Q9H1E3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NUCKS1Q9H1E3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 AC099791.2-201ENST00000605725 427 ntBASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.29■■□□□ 1.32
NUCKS1Q9H1E3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 OR7E47P-201ENST00000546390 1422 ntBASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 AC006455.2-201ENST00000429931 906 ntBASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
NUCKS1Q9H1E3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 AL139246.5-201ENST00000606645 996 ntBASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NUCKS1Q9H1E3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 AC092171.4-201ENST00000609130 632 ntBASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NUCKS1Q9H1E3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NUCKS1Q9H1E3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms