Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE2OQ9C0C9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBE2OQ9C0C9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 AC128676.1-201ENST00000454392 318 ntBASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE2OQ9C0C9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 AC005224.4-201ENST00000583262 1652 ntBASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 AC093323.1-202ENST00000635031 2045 ntBASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBE2OQ9C0C9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.78■■□□□ 1.4
UBE2OQ9C0C9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 ECEL1P3-201ENST00000427961 737 ntBASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBE2OQ9C0C9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 AC008550.1-201ENST00000511500 884 ntBASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
UBE2OQ9C0C9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 FAM210CP-201ENST00000445714 574 ntBASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 AC083880.1-201ENST00000608266 535 ntBASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 AC010331.1-201ENST00000611423 582 ntBASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
UBE2OQ9C0C9 OXCT2P1-201ENST00000447263 1535 ntBASIC23.74■■□□□ 1.39
UBE2OQ9C0C9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
UBE2OQ9C0C9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBE2OQ9C0C9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms