Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC137761.2-201ENST00000561729 223 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC145350.3-201ENST00000569033 163 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC080038.1-201ENST00000611274 1154 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 GXYLT1P5-201ENST00000614548 1189 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC080038.3-201ENST00000623346 1952 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC137767.1-201ENST00000602918 1920 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 AC026471.6-201ENST00000622954 1905 ntBASIC7.35□□□□□ -1.23
KRTAP4-3Q9BYR4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 ESRRAP2-201ENST00000418437 1549 ntBASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 CDCA4P2-201ENST00000441182 718 ntBASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AC104187.1-201ENST00000607510 612 ntBASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AC073111.5-205ENST00000641717 521 ntBASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 AC005224.4-201ENST00000583262 1652 ntBASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-3Q9BYR4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
KRTAP4-3Q9BYR4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
KRTAP4-3Q9BYR4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
KRTAP4-3Q9BYR4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
KRTAP4-3Q9BYR4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
KRTAP4-3Q9BYR4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC016769.1-201ENST00000409132 1010 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 HLA-L-209ENST00000420110 1011 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC006015.1-201ENST00000429970 570 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC079140.4-201ENST00000507448 529 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC079089.2-201ENST00000531211 1277 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 RAP2CP1-201ENST00000605103 478 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC087239.1-201ENST00000622671 572 ntBASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
KRTAP4-3Q9BYR4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms