Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC079089.2-201ENST00000531211 1277 ntBASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
YIPF4Q9BSR8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
YIPF4Q9BSR8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 AC024257.2-201ENST00000549699 147 ntBASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 MIR4767-201ENST00000582827 78 ntBASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 AL136162.1-201ENST00000607711 1078 ntBASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 AC068587.7-201ENST00000641602 218 ntBASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
YIPF4Q9BSR8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 FAM99A-202ENST00000538190 1989 ntBASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 AC010141.3-201ENST00000456659 717 ntBASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 AC087239.1-201ENST00000622671 572 ntBASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 AC007375.3-201ENST00000600936 2314 ntBASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
YIPF4Q9BSR8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 AC106739.1-201ENST00000617035 715 ntBASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 OR7E47P-201ENST00000546390 1422 ntBASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YIPF4Q9BSR8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 AC010542.4-201ENST00000563151 1910 ntBASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.17■□□□□ 0.82
YIPF4Q9BSR8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.16■□□□□ 0.82
YIPF4Q9BSR8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YIPF4Q9BSR8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms