Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 AL354811.1-201ENST00000610286 706 ntBASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 AC068587.7-201ENST00000641602 218 ntBASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 AC105233.4-201ENST00000642045 216 ntBASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 SLC25A24-204ENST00000569674 2357 ntBASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF1Q9BSM1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCGF1Q9BSM1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF1Q9BSM1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 YBX1P1-201ENST00000445822 960 ntBASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF1Q9BSM1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.93■□□□□ 0.46
PCGF1Q9BSM1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF1Q9BSM1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms