Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF5Q99942 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF5Q99942 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
RNF5Q99942 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
RNF5Q99942 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF5Q99942 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF5Q99942 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF5Q99942 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF5Q99942 AP001330.3-201ENST00000520123 633 ntBASIC17.24■□□□□ 0.35
RNF5Q99942 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF5Q99942 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF5Q99942 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF5Q99942 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF5Q99942 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF5Q99942 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
RNF5Q99942 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RNF5Q99942 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 FAM99A-202ENST00000538190 1989 ntBASIC17.23■□□□□ 0.35
RNF5Q99942 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF5Q99942 MIR939-201ENST00000401314 82 ntBASIC17.23■□□□□ 0.35
RNF5Q99942 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.23■□□□□ 0.35
RNF5Q99942 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF5Q99942 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF5Q99942 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF5Q99942 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF5Q99942 LINC00565-201ENST00000562710 2331 ntBASIC17.22■□□□□ 0.35
RNF5Q99942 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF5Q99942 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF5Q99942 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF5Q99942 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF5Q99942 AP004607.7-201ENST00000527152 1677 ntBASIC17.22■□□□□ 0.35
RNF5Q99942 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF5Q99942 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF5Q99942 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF5Q99942 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF5Q99942 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF5Q99942 AC104564.3-201ENST00000582367 638 ntBASIC17.21■□□□□ 0.35
RNF5Q99942 SMUG1P1-201ENST00000590640 811 ntBASIC17.21■□□□□ 0.35
RNF5Q99942 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF5Q99942 AL136967.2-201ENST00000623968 743 ntBASIC17.21■□□□□ 0.35
RNF5Q99942 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RNF5Q99942 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF5Q99942 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF5Q99942 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF5Q99942 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF5Q99942 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF5Q99942 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF5Q99942 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF5Q99942 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF5Q99942 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF5Q99942 SUDS3P1-201ENST00000505831 966 ntBASIC17.2■□□□□ 0.34
RNF5Q99942 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF5Q99942 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF5Q99942 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF5Q99942 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF5Q99942 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF5Q99942 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RNF5Q99942 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF5Q99942 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms