Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 Z98882.1-201ENST00000622160 2253 ntBASIC21.54■■□□□ 1.04
CPNE1Q99829 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE1Q99829 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE1Q99829 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE1Q99829 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPNE1Q99829 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.53■■□□□ 1.04
CPNE1Q99829 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.53■■□□□ 1.04
CPNE1Q99829 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.53■■□□□ 1.04
CPNE1Q99829 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 AC087239.1-201ENST00000622671 572 ntBASIC21.53■■□□□ 1.04
CPNE1Q99829 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CPNE1Q99829 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
CPNE1Q99829 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE1Q99829 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE1Q99829 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE1Q99829 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE1Q99829 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE1Q99829 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CPNE1Q99829 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE1Q99829 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CPNE1Q99829 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CPNE1Q99829 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CPNE1Q99829 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE1Q99829 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE1Q99829 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE1Q99829 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.5■■□□□ 1.03
CPNE1Q99829 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CPNE1Q99829 AC005229.4-201ENST00000610085 2198 ntBASIC21.5■■□□□ 1.03
CPNE1Q99829 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE1Q99829 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.5■■□□□ 1.03
CPNE1Q99829 AL512631.2-201ENST00000604634 923 ntBASIC21.5■■□□□ 1.03
CPNE1Q99829 AC026471.6-201ENST00000622954 1905 ntBASIC21.5■■□□□ 1.03
CPNE1Q99829 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CPNE1Q99829 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.5■■□□□ 1.03
CPNE1Q99829 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE1Q99829 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE1Q99829 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE1Q99829 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE1Q99829 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE1Q99829 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.49■■□□□ 1.03
CPNE1Q99829 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE1Q99829 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPNE1Q99829 AC010141.3-201ENST00000456659 717 ntBASIC21.49■■□□□ 1.03
CPNE1Q99829 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.49■■□□□ 1.03
CPNE1Q99829 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.49■■□□□ 1.03
CPNE1Q99829 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE1Q99829 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.49■■□□□ 1.03
CPNE1Q99829 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CPNE1Q99829 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CPNE1Q99829 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE1Q99829 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE1Q99829 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE1Q99829 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE1Q99829 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE1Q99829 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE1Q99829 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE1Q99829 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE1Q99829 AC104564.3-201ENST00000582367 638 ntBASIC21.48■■□□□ 1.03
CPNE1Q99829 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE1Q99829 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CPNE1Q99829 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE1Q99829 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CPNE1Q99829 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE1Q99829 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CPNE1Q99829 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE1Q99829 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE1Q99829 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE1Q99829 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE1Q99829 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE1Q99829 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE1Q99829 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms