Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A3Q99624 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SLC38A3Q99624 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A3Q99624 KRT87P-202ENST00000534226 1464 ntBASIC20.88■□□□□ 0.93
SLC38A3Q99624 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC38A3Q99624 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.87■□□□□ 0.93
SLC38A3Q99624 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC38A3Q99624 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC38A3Q99624 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC38A3Q99624 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLC38A3Q99624 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A3Q99624 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A3Q99624 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A3Q99624 AC080038.1-201ENST00000611274 1154 ntBASIC20.86■□□□□ 0.93
SLC38A3Q99624 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC38A3Q99624 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A3Q99624 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC38A3Q99624 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SLC38A3Q99624 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SLC38A3Q99624 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
SLC38A3Q99624 ESRRAP2-201ENST00000418437 1549 ntBASIC20.85■□□□□ 0.93
SLC38A3Q99624 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 AL034346.1-201ENST00000568244 1277 ntBASIC20.85■□□□□ 0.93
SLC38A3Q99624 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC38A3Q99624 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A3Q99624 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC38A3Q99624 BID-214ENST00000617586 542 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC38A3Q99624 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC38A3Q99624 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A3Q99624 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC38A3Q99624 LINC00526-201ENST00000581067 1875 ntBASIC20.84■□□□□ 0.93
SLC38A3Q99624 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC38A3Q99624 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A3Q99624 DUSP8P5-201ENST00000422884 1815 ntBASIC20.83■□□□□ 0.93
SLC38A3Q99624 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A3Q99624 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC38A3Q99624 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A3Q99624 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC38A3Q99624 KRT18P11-201ENST00000435214 1283 ntBASIC20.83■□□□□ 0.93
SLC38A3Q99624 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A3Q99624 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A3Q99624 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC38A3Q99624 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A3Q99624 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC38A3Q99624 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLC38A3Q99624 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A3Q99624 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A3Q99624 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC38A3Q99624 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC38A3Q99624 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A3Q99624 AC104187.1-201ENST00000607510 612 ntBASIC20.82■□□□□ 0.92
SLC38A3Q99624 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A3Q99624 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A3Q99624 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A3Q99624 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A3Q99624 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 AC055733.4-201ENST00000638462 1354 ntBASIC20.81■□□□□ 0.92
SLC38A3Q99624 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A3Q99624 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms