Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF2Q99496 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 AC026310.3-201ENST00000625186 2373 ntBASIC17.04■□□□□ 0.32
RNF2Q99496 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF2Q99496 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF2Q99496 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 FAM99A-202ENST00000538190 1989 ntBASIC17.04■□□□□ 0.32
RNF2Q99496 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF2Q99496 AC010542.4-201ENST00000563151 1910 ntBASIC17.04■□□□□ 0.32
RNF2Q99496 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF2Q99496 LINC01960-201ENST00000563759 1884 ntBASIC17.04■□□□□ 0.32
RNF2Q99496 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF2Q99496 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF2Q99496 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF2Q99496 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF2Q99496 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF2Q99496 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF2Q99496 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF2Q99496 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF2Q99496 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF2Q99496 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF2Q99496 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF2Q99496 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF2Q99496 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF2Q99496 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.03■□□□□ 0.32
RNF2Q99496 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF2Q99496 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF2Q99496 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RNF2Q99496 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF2Q99496 AL356740.2-201ENST00000601559 647 ntBASIC17.02■□□□□ 0.32
RNF2Q99496 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RNF2Q99496 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF2Q99496 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF2Q99496 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF2Q99496 AC009102.2-201ENST00000606772 1639 ntBASIC17.02■□□□□ 0.31
RNF2Q99496 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF2Q99496 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF2Q99496 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF2Q99496 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF2Q99496 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
RNF2Q99496 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF2Q99496 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF2Q99496 AC244015.2-201ENST00000616358 1861 ntBASIC17.01■□□□□ 0.31
RNF2Q99496 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF2Q99496 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF2Q99496 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF2Q99496 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF2Q99496 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF2Q99496 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.01■□□□□ 0.31
RNF2Q99496 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF2Q99496 AL117332.1-201ENST00000622628 974 ntBASIC17.01■□□□□ 0.31
RNF2Q99496 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF2Q99496 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF2Q99496 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17■□□□□ 0.31
RNF2Q99496 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17■□□□□ 0.31
RNF2Q99496 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17■□□□□ 0.31
RNF2Q99496 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17■□□□□ 0.31
RNF2Q99496 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17■□□□□ 0.31
RNF2Q99496 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17■□□□□ 0.31
RNF2Q99496 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF2Q99496 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17■□□□□ 0.31
RNF2Q99496 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF2Q99496 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RNF2Q99496 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RNF2Q99496 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF2Q99496 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF2Q99496 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF2Q99496 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF2Q99496 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RNF2Q99496 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF2Q99496 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms