Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX18Q96RF0 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX18Q96RF0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX18Q96RF0 AL356740.2-201ENST00000601559 647 ntBASIC19.52■□□□□ 0.72
SNX18Q96RF0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX18Q96RF0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX18Q96RF0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNX18Q96RF0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX18Q96RF0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX18Q96RF0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX18Q96RF0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SNX18Q96RF0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX18Q96RF0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNX18Q96RF0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX18Q96RF0 AL391422.3-201ENST00000603791 2761 ntBASIC19.5■□□□□ 0.71
SNX18Q96RF0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 MIR3621-201ENST00000580529 85 ntBASIC19.5■□□□□ 0.71
SNX18Q96RF0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNX18Q96RF0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX18Q96RF0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX18Q96RF0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX18Q96RF0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.48■□□□□ 0.71
SNX18Q96RF0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX18Q96RF0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX18Q96RF0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX18Q96RF0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX18Q96RF0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX18Q96RF0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SNX18Q96RF0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNX18Q96RF0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX18Q96RF0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms