Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 AL034346.1-201ENST00000568244 1277 ntBASIC17.95■□□□□ 0.46
GAFA1Q96PS6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 MIR6084-201ENST00000622012 110 ntBASIC17.95■□□□□ 0.46
GAFA1Q96PS6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 AC019069.1-201ENST00000610008 1333 ntBASIC17.95■□□□□ 0.46
GAFA1Q96PS6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GAFA1Q96PS6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GAFA1Q96PS6 BX005040.4-201ENST00000637145 1518 ntBASIC17.93■□□□□ 0.46
GAFA1Q96PS6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 AC079834.2-201ENST00000609776 1949 ntBASIC17.92■□□□□ 0.46
GAFA1Q96PS6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GAFA1Q96PS6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 C11orf96-202ENST00000528572 1834 ntBASIC17.91■□□□□ 0.46
GAFA1Q96PS6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 FAM99A-202ENST00000538190 1989 ntBASIC17.91■□□□□ 0.46
GAFA1Q96PS6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GAFA1Q96PS6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GAFA1Q96PS6 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.9■□□□□ 0.46
GAFA1Q96PS6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms