Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S3Q96PC3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S3Q96PC3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S3Q96PC3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S3Q96PC3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 AC073130.3-201ENST00000624389 2278 ntBASIC16.19■□□□□ 0.18
AP1S3Q96PC3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 FER1L4-210ENST00000615531 5998 ntBASIC16.19■□□□□ 0.18
AP1S3Q96PC3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP1S3Q96PC3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.18■□□□□ 0.18
AP1S3Q96PC3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP1S3Q96PC3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP1S3Q96PC3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms