Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 AC244015.2-201ENST00000616358 1861 ntBASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 AC096631.2-201ENST00000436136 790 ntBASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 AC106739.1-201ENST00000617035 715 ntBASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
PDLIM5Q96HC4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM5Q96HC4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
PDLIM5Q96HC4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PDLIM5Q96HC4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.96
PDLIM5Q96HC4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 PBX2P1-201ENST00000493219 1291 ntBASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDLIM5Q96HC4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 AC026471.6-201ENST00000622954 1905 ntBASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 EDA-201ENST00000338901 1233 ntBASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM5Q96HC4 AP004607.7-201ENST00000527152 1677 ntBASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 IGHV3-19-201ENST00000521488 291 ntBASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 AC126544.1-201ENST00000580842 1059 ntBASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM5Q96HC4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms