Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CDCA5Q96FF9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDCA5Q96FF9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
CDCA5Q96FF9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDCA5Q96FF9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDCA5Q96FF9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 ESRRAP1-201ENST00000400596 1257 ntBASIC25.52■■□□□ 1.68
CDCA5Q96FF9 AC007322.4-201ENST00000509611 723 ntBASIC25.52■■□□□ 1.68
CDCA5Q96FF9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 AC016405.3-201ENST00000607710 860 ntBASIC25.52■■□□□ 1.68
CDCA5Q96FF9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDCA5Q96FF9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CDCA5Q96FF9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDCA5Q96FF9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 AL596275.1-201ENST00000423464 877 ntBASIC25.5■■□□□ 1.67
CDCA5Q96FF9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.5■■□□□ 1.67
CDCA5Q96FF9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 BX276092.2-201ENST00000417668 665 ntBASIC25.49■■□□□ 1.67
CDCA5Q96FF9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDCA5Q96FF9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 AL512625.2-201ENST00000417533 625 ntBASIC25.48■■□□□ 1.67
CDCA5Q96FF9 AL158047.1-201ENST00000445918 881 ntBASIC25.48■■□□□ 1.67
CDCA5Q96FF9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 MYC-209ENST00000641252 345 ntBASIC25.48■■□□□ 1.67
CDCA5Q96FF9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDCA5Q96FF9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 AC008694.1-202ENST00000636953 945 ntBASIC25.47■■□□□ 1.67
CDCA5Q96FF9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
CDCA5Q96FF9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 AC069236.1-201ENST00000604339 616 ntBASIC25.46■■□□□ 1.67
CDCA5Q96FF9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.46■■□□□ 1.67
CDCA5Q96FF9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDCA5Q96FF9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CDCA5Q96FF9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.67
CDCA5Q96FF9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDCA5Q96FF9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.45■■□□□ 1.66
CDCA5Q96FF9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDCA5Q96FF9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms