Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF31Q96EP0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF31Q96EP0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF31Q96EP0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF31Q96EP0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF31Q96EP0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.69■□□□□ 0.9
RNF31Q96EP0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF31Q96EP0 AP004607.4-201ENST00000530158 1459 ntBASIC20.69■□□□□ 0.9
RNF31Q96EP0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF31Q96EP0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
RNF31Q96EP0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF31Q96EP0 AC016769.1-201ENST00000409132 1010 ntBASIC20.68■□□□□ 0.9
RNF31Q96EP0 AC087239.1-201ENST00000622671 572 ntBASIC20.68■□□□□ 0.9
RNF31Q96EP0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RNF31Q96EP0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF31Q96EP0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF31Q96EP0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF31Q96EP0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF31Q96EP0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RNF31Q96EP0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF31Q96EP0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF31Q96EP0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF31Q96EP0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF31Q96EP0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF31Q96EP0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF31Q96EP0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.65■□□□□ 0.9
RNF31Q96EP0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF31Q96EP0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF31Q96EP0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF31Q96EP0 AC080038.1-201ENST00000611274 1154 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms