Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.87■□□□□ 0.93
TUBGCP3Q96CW5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 UNC93B8-201ENST00000511903 705 ntBASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 AL451085.2-201ENST00000605085 799 ntBASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TUBGCP3Q96CW5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 AC133637.1-201ENST00000624115 1537 ntBASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.85■□□□□ 0.93
TUBGCP3Q96CW5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 AL031602.1-201ENST00000633169 911 ntBASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 Z98882.1-201ENST00000622160 2253 ntBASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TUBGCP3Q96CW5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 AC079089.2-201ENST00000531211 1277 ntBASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.83■□□□□ 0.93
TUBGCP3Q96CW5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TUBGCP3Q96CW5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 AC006455.2-201ENST00000429931 906 ntBASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 pRNA.6-201ENST00000610482 90 ntBASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 pRNA.5-201ENST00000612139 90 ntBASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 pRNA.11-201ENST00000618423 90 ntBASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 pRNA.13-201ENST00000619112 90 ntBASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TUBGCP3Q96CW5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TUBGCP3Q96CW5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms