Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC133637.1-201ENST00000624115 1537 ntBASIC19.32■□□□□ 0.68
PTP4A1Q93096 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTP4A1Q93096 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTP4A1Q93096 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTP4A1Q93096 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTP4A1Q93096 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A1Q93096 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A1Q93096 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A1Q93096 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTP4A1Q93096 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTP4A1Q93096 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 AC006455.2-201ENST00000429931 906 ntBASIC19.29■□□□□ 0.68
PTP4A1Q93096 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 FEM1AP4-201ENST00000443167 1987 ntBASIC19.29■□□□□ 0.68
PTP4A1Q93096 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 AF106564.1-201ENST00000607058 2553 ntBASIC19.29■□□□□ 0.68
PTP4A1Q93096 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTP4A1Q93096 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.29■□□□□ 0.68
PTP4A1Q93096 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 pRNA.6-201ENST00000610482 90 ntBASIC19.28■□□□□ 0.68
PTP4A1Q93096 pRNA.5-201ENST00000612139 90 ntBASIC19.28■□□□□ 0.68
PTP4A1Q93096 pRNA.11-201ENST00000618423 90 ntBASIC19.28■□□□□ 0.68
PTP4A1Q93096 pRNA.13-201ENST00000619112 90 ntBASIC19.28■□□□□ 0.68
PTP4A1Q93096 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.28■□□□□ 0.68
PTP4A1Q93096 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTP4A1Q93096 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.27■□□□□ 0.68
PTP4A1Q93096 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTP4A1Q93096 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms