Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.24■□□□□ 0.67
GCN1Q92616 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.24■□□□□ 0.67
GCN1Q92616 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.24■□□□□ 0.67
GCN1Q92616 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.24■□□□□ 0.67
GCN1Q92616 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.23■□□□□ 0.67
GCN1Q92616 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 AL135905.2-201ENST00000584934 1404 ntBASIC19.23■□□□□ 0.67
GCN1Q92616 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GCN1Q92616 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.23■□□□□ 0.67
GCN1Q92616 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GCN1Q92616 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GCN1Q92616 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.23■□□□□ 0.67
GCN1Q92616 AC069236.1-201ENST00000604339 616 ntBASIC19.23■□□□□ 0.67
GCN1Q92616 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.22■□□□□ 0.67
GCN1Q92616 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.22■□□□□ 0.67
GCN1Q92616 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.22■□□□□ 0.67
GCN1Q92616 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GCN1Q92616 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GCN1Q92616 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GCN1Q92616 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GCN1Q92616 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 TERF1P5-201ENST00000477545 1207 ntBASIC19.22■□□□□ 0.67
GCN1Q92616 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GCN1Q92616 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
GCN1Q92616 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.22■□□□□ 0.67
GCN1Q92616 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.22■□□□□ 0.67
GCN1Q92616 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GCN1Q92616 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GCN1Q92616 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.21■□□□□ 0.67
GCN1Q92616 AC010980.2-201ENST00000587099 1412 ntBASIC19.21■□□□□ 0.67
GCN1Q92616 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GCN1Q92616 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GCN1Q92616 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.2■□□□□ 0.66
GCN1Q92616 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.2■□□□□ 0.66
GCN1Q92616 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.2■□□□□ 0.66
GCN1Q92616 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
GCN1Q92616 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 DUSP5P1-201ENST00000441325 1139 ntBASIC19.2■□□□□ 0.66
GCN1Q92616 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GCN1Q92616 AC145285.6-201ENST00000604632 637 ntBASIC19.2■□□□□ 0.66
GCN1Q92616 AC005224.4-201ENST00000583262 1652 ntBASIC19.2■□□□□ 0.66
GCN1Q92616 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCN1Q92616 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
GCN1Q92616 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GCN1Q92616 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.19■□□□□ 0.66
GCN1Q92616 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.19■□□□□ 0.66
GCN1Q92616 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
GCN1Q92616 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GCN1Q92616 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GCN1Q92616 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GCN1Q92616 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GCN1Q92616 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GCN1Q92616 AC010141.2-201ENST00000452426 721 ntBASIC19.19■□□□□ 0.66
GCN1Q92616 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GCN1Q92616 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.19■□□□□ 0.66
GCN1Q92616 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GCN1Q92616 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.19■□□□□ 0.66
GCN1Q92616 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
GCN1Q92616 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.18■□□□□ 0.66
GCN1Q92616 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms