Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 AC079089.2-201ENST00000531211 1277 ntBASIC18.8■□□□□ 0.6
RGP1Q92546 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 KRT125P-201ENST00000546827 989 ntBASIC18.8■□□□□ 0.6
RGP1Q92546 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 Z92544.1-202ENST00000571933 1220 ntBASIC18.8■□□□□ 0.6
RGP1Q92546 MIR4787-201ENST00000607364 84 ntBASIC18.8■□□□□ 0.6
RGP1Q92546 AC010997.5-201ENST00000609182 354 ntBASIC18.8■□□□□ 0.6
RGP1Q92546 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.8■□□□□ 0.6
RGP1Q92546 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RGP1Q92546 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGP1Q92546 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.79■□□□□ 0.6
RGP1Q92546 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.79■□□□□ 0.6
RGP1Q92546 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGP1Q92546 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.78■□□□□ 0.6
RGP1Q92546 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.78■□□□□ 0.6
RGP1Q92546 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.78■□□□□ 0.6
RGP1Q92546 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RGP1Q92546 AL451085.2-201ENST00000605085 799 ntBASIC18.78■□□□□ 0.6
RGP1Q92546 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.78■□□□□ 0.6
RGP1Q92546 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.78■□□□□ 0.6
RGP1Q92546 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGP1Q92546 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.78■□□□□ 0.6
RGP1Q92546 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.78■□□□□ 0.6
RGP1Q92546 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RGP1Q92546 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RGP1Q92546 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGP1Q92546 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.77■□□□□ 0.6
RGP1Q92546 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RGP1Q92546 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.77■□□□□ 0.59
RGP1Q92546 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
RGP1Q92546 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
RGP1Q92546 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.76■□□□□ 0.59
RGP1Q92546 TSPY9P-201ENST00000440215 945 ntBASIC18.76■□□□□ 0.59
RGP1Q92546 TSPY11P-201ENST00000442607 1045 ntBASIC18.76■□□□□ 0.59
RGP1Q92546 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RGP1Q92546 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RGP1Q92546 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGP1Q92546 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 AC133637.1-201ENST00000624115 1537 ntBASIC18.75■□□□□ 0.59
RGP1Q92546 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RGP1Q92546 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.75■□□□□ 0.59
RGP1Q92546 AC006455.2-201ENST00000429931 906 ntBASIC18.75■□□□□ 0.59
RGP1Q92546 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.75■□□□□ 0.59
RGP1Q92546 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RGP1Q92546 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.75■□□□□ 0.59
RGP1Q92546 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RGP1Q92546 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RGP1Q92546 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.74■□□□□ 0.59
RGP1Q92546 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RGP1Q92546 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms