Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 AC022517.1-201ENST00000592429 346 ntBASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PSPC1Q8WXF1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PSPC1Q8WXF1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PSPC1Q8WXF1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PSPC1Q8WXF1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 AP004607.7-201ENST00000527152 1677 ntBASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.81■■□□□ 1.4
PSPC1Q8WXF1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 AC079140.4-201ENST00000507448 529 ntBASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSPC1Q8WXF1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 AL034346.1-201ENST00000568244 1277 ntBASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PSPC1Q8WXF1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 KRT18P61-201ENST00000585825 1298 ntBASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 AP004607.4-201ENST00000530158 1459 ntBASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PSPC1Q8WXF1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 IKBKGP1-201ENST00000612193 1073 ntBASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSPC1Q8WXF1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms