Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SHROOM3Q8TF72 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHROOM3Q8TF72 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SHROOM3Q8TF72 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SHROOM3Q8TF72 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
SHROOM3Q8TF72 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 AC026471.6-201ENST00000622954 1905 ntBASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 AC034268.1-201ENST00000441047 882 ntBASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHROOM3Q8TF72 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 AC079834.2-201ENST00000609776 1949 ntBASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHROOM3Q8TF72 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHROOM3Q8TF72 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 AC091305.1-201ENST00000479476 895 ntBASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SHROOM3Q8TF72 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.02■■□□□ 1.11
SHROOM3Q8TF72 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.02■■□□□ 1.11
SHROOM3Q8TF72 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.02■■□□□ 1.11
SHROOM3Q8TF72 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
SHROOM3Q8TF72 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 SMUG1P1-201ENST00000590640 811 ntBASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHROOM3Q8TF72 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22■■□□□ 1.11
SHROOM3Q8TF72 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22■■□□□ 1.11
SHROOM3Q8TF72 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHROOM3Q8TF72 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.99■■□□□ 1.11
SHROOM3Q8TF72 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms