Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNED1Q8TER0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNED1Q8TER0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNED1Q8TER0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SNED1Q8TER0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNED1Q8TER0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.47■■□□□ 1.83
SNED1Q8TER0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.47■■□□□ 1.83
SNED1Q8TER0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SNED1Q8TER0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNED1Q8TER0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SNED1Q8TER0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.47■■□□□ 1.83
SNED1Q8TER0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNED1Q8TER0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SNED1Q8TER0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SNED1Q8TER0 MIPEPP3-201ENST00000412105 444 ntBASIC26.46■■□□□ 1.83
SNED1Q8TER0 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.46■■□□□ 1.83
SNED1Q8TER0 SLC7A5P1-201ENST00000568957 537 ntBASIC26.46■■□□□ 1.83
SNED1Q8TER0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNED1Q8TER0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
SNED1Q8TER0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
SNED1Q8TER0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SNED1Q8TER0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.45■■□□□ 1.82
SNED1Q8TER0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNED1Q8TER0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNED1Q8TER0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNED1Q8TER0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.44■■□□□ 1.82
SNED1Q8TER0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.44■■□□□ 1.82
SNED1Q8TER0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 EEF1DP3-203ENST00000566025 782 ntBASIC26.44■■□□□ 1.82
SNED1Q8TER0 AC083880.1-201ENST00000608266 535 ntBASIC26.44■■□□□ 1.82
SNED1Q8TER0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.44■■□□□ 1.82
SNED1Q8TER0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SNED1Q8TER0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
SNED1Q8TER0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNED1Q8TER0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNED1Q8TER0 RPS2P52-201ENST00000469610 820 ntBASIC26.43■■□□□ 1.82
SNED1Q8TER0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 MIR4758-201ENST00000577688 71 ntBASIC26.43■■□□□ 1.82
SNED1Q8TER0 AC092118.2-201ENST00000613495 667 ntBASIC26.43■■□□□ 1.82
SNED1Q8TER0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNED1Q8TER0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNED1Q8TER0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNED1Q8TER0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SNED1Q8TER0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.42■■□□□ 1.82
SNED1Q8TER0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SNED1Q8TER0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.42■■□□□ 1.82
SNED1Q8TER0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 MYC-209ENST00000641252 345 ntBASIC26.42■■□□□ 1.82
SNED1Q8TER0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNED1Q8TER0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.42■■□□□ 1.82
SNED1Q8TER0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 AC093787.1-201ENST00000450396 207 ntBASIC26.41■■□□□ 1.82
SNED1Q8TER0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.41■■□□□ 1.82
SNED1Q8TER0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNED1Q8TER0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.4■■□□□ 1.82
SNED1Q8TER0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNED1Q8TER0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SNED1Q8TER0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.4■■□□□ 1.82
SNED1Q8TER0 TERF1P5-201ENST00000477545 1207 ntBASIC26.4■■□□□ 1.82
SNED1Q8TER0 RNA5SP413-201ENST00000516373 109 ntBASIC26.4■■□□□ 1.82
SNED1Q8TER0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.4■■□□□ 1.82
SNED1Q8TER0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNED1Q8TER0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.4■■□□□ 1.82
SNED1Q8TER0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms