Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SH3RF3Q8TEJ3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH3RF3Q8TEJ3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH3RF3Q8TEJ3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.73■■□□□ 1.71
SH3RF3Q8TEJ3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.73■■□□□ 1.71
SH3RF3Q8TEJ3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 BID-214ENST00000617586 542 ntTSL 5 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SH3RF3Q8TEJ3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SH3RF3Q8TEJ3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SH3RF3Q8TEJ3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SH3RF3Q8TEJ3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 AC011767.1-201ENST00000617410 1153 ntBASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.69■■□□□ 1.7
SH3RF3Q8TEJ3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SH3RF3Q8TEJ3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 ID1-201ENST00000376105 1233 ntBASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.67■■□□□ 1.7
SH3RF3Q8TEJ3 C9orf163-202ENST00000624034 2573 ntBASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 AC139530.1-201ENST00000575312 1977 ntBASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SH3RF3Q8TEJ3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3RF3Q8TEJ3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 AL034346.1-201ENST00000568244 1277 ntBASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 MFSD11-216ENST00000590393 1141 ntBASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 AP001160.3-201ENST00000601484 763 ntBASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 UBE2DNL-204ENST00000602536 740 ntBASIC25.64■■□□□ 1.7
SH3RF3Q8TEJ3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF3Q8TEJ3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF3Q8TEJ3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.64■■□□□ 1.69
SH3RF3Q8TEJ3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SH3RF3Q8TEJ3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SH3RF3Q8TEJ3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
SH3RF3Q8TEJ3 AP006587.3-201ENST00000525742 1516 ntBASIC25.63■■□□□ 1.69
SH3RF3Q8TEJ3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
SH3RF3Q8TEJ3 KRT18P11-201ENST00000435214 1283 ntBASIC25.63■■□□□ 1.69
SH3RF3Q8TEJ3 AC026185.1-201ENST00000445748 174 ntBASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms