Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 AC138907.5-202ENST00000569484 235 ntBASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ALMS1Q8TCU4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 AC073912.3-201ENST00000624414 853 ntBASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 KRT18P20-201ENST00000548986 1279 ntBASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 OR10C1-204ENST00000622521 1039 ntBASIC14.72□□□□□ -0.05
ALMS1Q8TCU4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ALMS1Q8TCU4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ALMS1Q8TCU4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 AL512625.2-201ENST00000417533 625 ntBASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 DUSP8P3-201ENST00000399571 1760 ntBASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.7□□□□□ -0.06
ALMS1Q8TCU4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 RPS2P4-201ENST00000476944 856 ntBASIC14.69□□□□□ -0.06
ALMS1Q8TCU4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms