Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 pRNA.6-201ENST00000610482 90 ntBASIC21.17■□□□□ 0.98
RDH11Q8TC12 pRNA.5-201ENST00000612139 90 ntBASIC21.17■□□□□ 0.98
RDH11Q8TC12 pRNA.11-201ENST00000618423 90 ntBASIC21.17■□□□□ 0.98
RDH11Q8TC12 pRNA.13-201ENST00000619112 90 ntBASIC21.17■□□□□ 0.98
RDH11Q8TC12 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RDH11Q8TC12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RDH11Q8TC12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RDH11Q8TC12 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RDH11Q8TC12 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RDH11Q8TC12 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RDH11Q8TC12 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
RDH11Q8TC12 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RDH11Q8TC12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 GUSBP5-201ENST00000418136 578 ntBASIC21.15■□□□□ 0.98
RDH11Q8TC12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RDH11Q8TC12 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
RDH11Q8TC12 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RDH11Q8TC12 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RDH11Q8TC12 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RDH11Q8TC12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.14■□□□□ 0.98
RDH11Q8TC12 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 AC006455.2-201ENST00000429931 906 ntBASIC21.14■□□□□ 0.97
RDH11Q8TC12 UNC93B8-201ENST00000511903 705 ntBASIC21.14■□□□□ 0.97
RDH11Q8TC12 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.14■□□□□ 0.97
RDH11Q8TC12 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.14■□□□□ 0.97
RDH11Q8TC12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RDH11Q8TC12 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RDH11Q8TC12 AC026471.6-201ENST00000622954 1905 ntBASIC21.14■□□□□ 0.97
RDH11Q8TC12 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.13■□□□□ 0.97
RDH11Q8TC12 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.13■□□□□ 0.97
RDH11Q8TC12 AC087239.1-201ENST00000622671 572 ntBASIC21.13■□□□□ 0.97
RDH11Q8TC12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.13■□□□□ 0.97
RDH11Q8TC12 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RDH11Q8TC12 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RDH11Q8TC12 OR2I1P-207ENST00000453522 948 ntBASIC21.12■□□□□ 0.97
RDH11Q8TC12 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.12■□□□□ 0.97
RDH11Q8TC12 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RDH11Q8TC12 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RDH11Q8TC12 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RDH11Q8TC12 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.11■□□□□ 0.97
RDH11Q8TC12 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RDH11Q8TC12 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RDH11Q8TC12 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RDH11Q8TC12 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RDH11Q8TC12 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.11■□□□□ 0.97
RDH11Q8TC12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.11■□□□□ 0.97
RDH11Q8TC12 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.11■□□□□ 0.97
RDH11Q8TC12 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 448.1 ms