Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRFBP1Q8NEF9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 MIR572-201ENST00000384983 95 ntBASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRFBP1Q8NEF9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRFBP1Q8NEF9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.52■□□□□ 0.88
SRFBP1Q8NEF9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRFBP1Q8NEF9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRFBP1Q8NEF9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.52■□□□□ 0.88
SRFBP1Q8NEF9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SRFBP1Q8NEF9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.52■□□□□ 0.87
SRFBP1Q8NEF9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.52■□□□□ 0.87
SRFBP1Q8NEF9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 C11orf96-202ENST00000528572 1834 ntBASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 EP400NL-214ENST00000641289 2402 ntBASIC20.51■□□□□ 0.87
SRFBP1Q8NEF9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 SMUG1P1-201ENST00000590640 811 ntBASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 AC105233.4-201ENST00000642045 216 ntBASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRFBP1Q8NEF9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
SRFBP1Q8NEF9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 AP004607.7-201ENST00000527152 1677 ntBASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRFBP1Q8NEF9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms