Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
CHDHQ8NE62 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.33■□□□□ 0.85
CHDHQ8NE62 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHDHQ8NE62 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.33■□□□□ 0.85
CHDHQ8NE62 CA15P2-201ENST00000611168 834 ntBASIC20.33■□□□□ 0.85
CHDHQ8NE62 MIR5787-201ENST00000611784 55 ntBASIC20.33■□□□□ 0.85
CHDHQ8NE62 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHDHQ8NE62 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHDHQ8NE62 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHDHQ8NE62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.33■□□□□ 0.84
CHDHQ8NE62 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHDHQ8NE62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.32■□□□□ 0.84
CHDHQ8NE62 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.32■□□□□ 0.84
CHDHQ8NE62 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CHDHQ8NE62 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHDHQ8NE62 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 MIR3181-201ENST00000578512 73 ntBASIC20.31■□□□□ 0.84
CHDHQ8NE62 MIR4466-201ENST00000606121 54 ntBASIC20.31■□□□□ 0.84
CHDHQ8NE62 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.31■□□□□ 0.84
CHDHQ8NE62 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHDHQ8NE62 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHDHQ8NE62 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 AC010542.4-201ENST00000563151 1910 ntBASIC20.3■□□□□ 0.84
CHDHQ8NE62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.3■□□□□ 0.84
CHDHQ8NE62 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHDHQ8NE62 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CHDHQ8NE62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.29■□□□□ 0.84
CHDHQ8NE62 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHDHQ8NE62 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.29■□□□□ 0.84
CHDHQ8NE62 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHDHQ8NE62 AC005229.4-201ENST00000610085 2198 ntBASIC20.29■□□□□ 0.84
CHDHQ8NE62 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHDHQ8NE62 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHDHQ8NE62 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHDHQ8NE62 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHDHQ8NE62 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHDHQ8NE62 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 AC142381.2-201ENST00000566120 298 ntBASIC20.28■□□□□ 0.84
CHDHQ8NE62 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 AL031602.1-201ENST00000633169 911 ntBASIC20.28■□□□□ 0.84
CHDHQ8NE62 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHDHQ8NE62 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.28■□□□□ 0.84
CHDHQ8NE62 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.27■□□□□ 0.84
CHDHQ8NE62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHDHQ8NE62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms