Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AC131212.1-201ENST00000613771 668 ntBASIC23.96■■□□□ 1.43
DHX40Q8IX18 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DHX40Q8IX18 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DHX40Q8IX18 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DHX40Q8IX18 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DHX40Q8IX18 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DHX40Q8IX18 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DHX40Q8IX18 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DHX40Q8IX18 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
DHX40Q8IX18 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 AL356441.2-201ENST00000443009 864 ntBASIC23.95■■□□□ 1.42
DHX40Q8IX18 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
DHX40Q8IX18 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
DHX40Q8IX18 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DHX40Q8IX18 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DHX40Q8IX18 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DHX40Q8IX18 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DHX40Q8IX18 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 AC079089.2-201ENST00000531211 1277 ntBASIC23.94■■□□□ 1.42
DHX40Q8IX18 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DHX40Q8IX18 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
DHX40Q8IX18 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.94■■□□□ 1.42
DHX40Q8IX18 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.93■■□□□ 1.42
DHX40Q8IX18 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
DHX40Q8IX18 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.93■■□□□ 1.42
DHX40Q8IX18 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
DHX40Q8IX18 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.93■■□□□ 1.42
DHX40Q8IX18 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.93■■□□□ 1.42
DHX40Q8IX18 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DHX40Q8IX18 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 MTDHP2-201ENST00000601468 714 ntBASIC23.92■■□□□ 1.42
DHX40Q8IX18 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DHX40Q8IX18 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.92■■□□□ 1.42
DHX40Q8IX18 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.91■■□□□ 1.42
DHX40Q8IX18 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
DHX40Q8IX18 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DHX40Q8IX18 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.9■■□□□ 1.42
DHX40Q8IX18 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DHX40Q8IX18 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.89■■□□□ 1.42
DHX40Q8IX18 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
DHX40Q8IX18 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.89■■□□□ 1.42
DHX40Q8IX18 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.89■■□□□ 1.41
DHX40Q8IX18 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
DHX40Q8IX18 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms