Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 pRNA.5-201ENST00000612139 90 ntBASIC21.56■■□□□ 1.04
RAPH1Q70E73 pRNA.11-201ENST00000618423 90 ntBASIC21.56■■□□□ 1.04
RAPH1Q70E73 pRNA.13-201ENST00000619112 90 ntBASIC21.56■■□□□ 1.04
RAPH1Q70E73 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RAPH1Q70E73 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.55■■□□□ 1.04
RAPH1Q70E73 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 AL035685.1-201ENST00000636663 812 ntBASIC21.55■■□□□ 1.04
RAPH1Q70E73 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAPH1Q70E73 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.55■■□□□ 1.04
RAPH1Q70E73 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.54■■□□□ 1.04
RAPH1Q70E73 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 AC006455.2-201ENST00000429931 906 ntBASIC21.54■■□□□ 1.04
RAPH1Q70E73 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 AL356740.2-201ENST00000601559 647 ntBASIC21.54■■□□□ 1.04
RAPH1Q70E73 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RAPH1Q70E73 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RAPH1Q70E73 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAPH1Q70E73 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
RAPH1Q70E73 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.53■■□□□ 1.04
RAPH1Q70E73 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPH1Q70E73 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RAPH1Q70E73 AC099791.2-201ENST00000605725 427 ntBASIC21.53■■□□□ 1.04
RAPH1Q70E73 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPH1Q70E73 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAPH1Q70E73 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.53■■□□□ 1.04
RAPH1Q70E73 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPH1Q70E73 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAPH1Q70E73 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPH1Q70E73 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RAPH1Q70E73 AC026310.3-201ENST00000625186 2373 ntBASIC21.52■■□□□ 1.04
RAPH1Q70E73 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAPH1Q70E73 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RAPH1Q70E73 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RAPH1Q70E73 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPH1Q70E73 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPH1Q70E73 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPH1Q70E73 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPH1Q70E73 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPH1Q70E73 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPH1Q70E73 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPH1Q70E73 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAPH1Q70E73 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms