Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 KLF13-207ENST00000560473 489 ntTSL 3 BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 AP006587.3-201ENST00000525742 1516 ntBASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 AC133552.2-202ENST00000575694 574 ntBASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 MIR4651-201ENST00000582622 73 ntBASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC141Q6ZP82 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 AL034346.1-201ENST00000568244 1277 ntBASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC141Q6ZP82 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
CCDC141Q6ZP82 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
CCDC141Q6ZP82 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
CCDC141Q6ZP82 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
CCDC141Q6ZP82 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
CCDC141Q6ZP82 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CCDC141Q6ZP82 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 AC013268.1-206ENST00000638368 961 ntBASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 AC112229.1-201ENST00000639295 961 ntBASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
CCDC141Q6ZP82 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 LINC00526-201ENST00000581067 1875 ntBASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 TSPY20P-201ENST00000450910 630 ntBASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC141Q6ZP82 AC073210.2-201ENST00000430369 194 ntBASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 AF201337.1-201ENST00000520239 748 ntBASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 PFKL-212ENST00000628044 129 ntTSL 3 BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 AC007322.4-201ENST00000509611 723 ntBASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 TMEM191A-211ENST00000637163 1067 ntBASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC32.48■■■□□ 2.79
CCDC141Q6ZP82 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 OR7E47P-201ENST00000546390 1422 ntBASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC32.47■■■□□ 2.79
CCDC141Q6ZP82 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC141Q6ZP82 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
CCDC141Q6ZP82 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CCDC141Q6ZP82 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC32.45■■■□□ 2.78
CCDC141Q6ZP82 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.78
CCDC141Q6ZP82 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 SLC7A5P1-201ENST00000568957 537 ntBASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC141Q6ZP82 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 RGMA-211ENST00000557420 989 ntTSL 3 BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.43■■■□□ 2.78
CCDC141Q6ZP82 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms