Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC004777.1-201ENST00000624317 287 ntBASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 AL117328.2-201ENST00000624617 1940 ntBASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 SLC47A1P1-202ENST00000449666 945 ntBASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 OR2I1P-207ENST00000453522 948 ntBASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PPP4R3CPQ6ZMV5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC083964.1-201ENST00000607549 630 ntBASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 AL022328.3-201ENST00000607943 679 ntBASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PPP4R3CPQ6ZMV5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC019227.1-201ENST00000526902 510 ntBASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PPP4R3CPQ6ZMV5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC092451.2-201ENST00000538746 658 ntBASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
PPP4R3CPQ6ZMV5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PPP4R3CPQ6ZMV5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3CPQ6ZMV5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC115989.2-201ENST00000578640 563 ntBASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 MKKS-203ENST00000609375 882 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3CPQ6ZMV5 AC127496.7-201ENST00000625110 1798 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms