Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF544Q6NX49 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF544Q6NX49 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF544Q6NX49 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 AC092171.4-201ENST00000609130 632 ntBASIC19.61■□□□□ 0.73
ZNF544Q6NX49 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF544Q6NX49 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ZNF544Q6NX49 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF544Q6NX49 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms