Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 AL034346.1-201ENST00000568244 1277 ntBASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
FNDC3BQ53EP0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FNDC3BQ53EP0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
FNDC3BQ53EP0 AC055733.4-201ENST00000638462 1354 ntBASIC21.83■■□□□ 1.08
FNDC3BQ53EP0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FNDC3BQ53EP0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 KRT18P11-201ENST00000435214 1283 ntBASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 AC073111.5-205ENST00000641717 521 ntBASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FNDC3BQ53EP0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FNDC3BQ53EP0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.8■■□□□ 1.08
FNDC3BQ53EP0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 ID1-201ENST00000376105 1233 ntBASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 CDCA4P2-201ENST00000441182 718 ntBASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 AC087742.1-201ENST00000575880 1738 ntBASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
FNDC3BQ53EP0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 AC011767.1-201ENST00000617410 1153 ntBASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3BQ53EP0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 AC137767.1-201ENST00000602918 1920 ntBASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3BQ53EP0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FNDC3BQ53EP0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms