Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 AC019069.1-201ENST00000610008 1333 ntBASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KHDC1Q4VXA5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KHDC1Q4VXA5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 AL031602.1-201ENST00000633169 911 ntBASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 FBXW4P1-201ENST00000426721 2239 ntBASIC21.71■■□□□ 1.07
KHDC1Q4VXA5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
KHDC1Q4VXA5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 AL121603.2-201ENST00000557373 2117 ntBASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 ZNRF2P3-201ENST00000424200 374 ntBASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 AC105265.2-201ENST00000467189 838 ntBASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 AC126544.1-201ENST00000580842 1059 ntBASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
KHDC1Q4VXA5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 ESRRAP2-201ENST00000418437 1549 ntBASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
KHDC1Q4VXA5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KHDC1Q4VXA5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms