Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.02■■□□□ 1.76
PDS5AQ29RF7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
PDS5AQ29RF7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 BID-214ENST00000617586 542 ntTSL 5 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.01■■□□□ 1.75
PDS5AQ29RF7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26■■□□□ 1.75
PDS5AQ29RF7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PDS5AQ29RF7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 AC073111.5-205ENST00000641717 521 ntBASIC26■■□□□ 1.75
PDS5AQ29RF7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PDS5AQ29RF7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDS5AQ29RF7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDS5AQ29RF7 AC139530.1-201ENST00000575312 1977 ntBASIC25.99■■□□□ 1.75
PDS5AQ29RF7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
PDS5AQ29RF7 CDCA4P2-201ENST00000441182 718 ntBASIC25.99■■□□□ 1.75
PDS5AQ29RF7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDS5AQ29RF7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.99■■□□□ 1.75
PDS5AQ29RF7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDS5AQ29RF7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDS5AQ29RF7 EEF1DP3-203ENST00000566025 782 ntBASIC25.98■■□□□ 1.75
PDS5AQ29RF7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDS5AQ29RF7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDS5AQ29RF7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDS5AQ29RF7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 AC138907.5-202ENST00000569484 235 ntBASIC25.97■■□□□ 1.75
PDS5AQ29RF7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PDS5AQ29RF7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 AC010141.2-201ENST00000452426 721 ntBASIC25.96■■□□□ 1.75
PDS5AQ29RF7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.96■■□□□ 1.75
PDS5AQ29RF7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PDS5AQ29RF7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDS5AQ29RF7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.95■■□□□ 1.74
PDS5AQ29RF7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.95■■□□□ 1.74
PDS5AQ29RF7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDS5AQ29RF7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDS5AQ29RF7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 MFSD11-216ENST00000590393 1141 ntBASIC25.94■■□□□ 1.74
PDS5AQ29RF7 AP001160.3-201ENST00000601484 763 ntBASIC25.94■■□□□ 1.74
PDS5AQ29RF7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PDS5AQ29RF7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms